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Journal: bioRxiv

Article Title: Comparative Genomics of two Inbred Lines of the Potato Cyst Nematode Globodera rostochiensis reveals disparate Effector Family-specific Diversification Patterns

doi: 10.1101/2021.03.15.435409

Figure Lengend Snippet:

Article Snippet: Two inbred lines of the potato cyst nematode G. rostochiensis were initially derived from crossings between individuals from two populations, Ro1-Mierenbos and Ro5-Harmerz ( Janssen et al. , 1990 ).

Techniques:

A. Relatively level of SNP heterozygosity of Gr-Line19 and JHI-Ro1 (JHI – James Hutton Institute, Scotland, UK). Both lines were compared to Gr-Line22. JHI Ro1 was used as the current G. rostochiensis reference genome. B. Comparison overall genomic constitution of G. rostochiensis inbred lines 19 and 22. In this overview structural variants are shown. Structural variants are DNA region of approximately 1 kb and larger in size, and can include inversions, insertions, deletions etc.

Journal: bioRxiv

Article Title: Comparative Genomics of two Inbred Lines of the Potato Cyst Nematode Globodera rostochiensis reveals disparate Effector Family-specific Diversification Patterns

doi: 10.1101/2021.03.15.435409

Figure Lengend Snippet: A. Relatively level of SNP heterozygosity of Gr-Line19 and JHI-Ro1 (JHI – James Hutton Institute, Scotland, UK). Both lines were compared to Gr-Line22. JHI Ro1 was used as the current G. rostochiensis reference genome. B. Comparison overall genomic constitution of G. rostochiensis inbred lines 19 and 22. In this overview structural variants are shown. Structural variants are DNA region of approximately 1 kb and larger in size, and can include inversions, insertions, deletions etc.

Article Snippet: Two inbred lines of the potato cyst nematode G. rostochiensis were initially derived from crossings between individuals from two populations, Ro1-Mierenbos and Ro5-Harmerz ( Janssen et al. , 1990 ).

Techniques: Comparison